Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENFLTHAKEGYYNGLSFHRVIKDFMIQSGDPNGDGTGGK--SIWNSKDKKKDSGNGFVNEISPYLYNI-RGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVIS-GMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
| 3BKP Chain:A ((18-196)) | -----------------------------------------------------------------------GSTRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFDG---------KPFDVETHPRLKFRYRGLVGVANLG--TNGNQFFITLAR--A----------------------DVLNNAYTLFGKVTGHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLWNPFED |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60520 for 1279 contacts (-47.3/contact) +
2D Compatibility (PS) -17384 + (NN) -7799 + (LL) 6468
1D Compatibility (HY) -12000 + (ID) 3050
Total energy: -94285.0 ( -73.72 by residue)
QMean score : 0.543
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