Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
1JY8 Chain:A ((1-155))
-MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLI--
General information:
TITO was launched using:
RESULT:
Template:
1JY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114961 for 1332 contacts (-86.3/contact) +
2D Compatibility (PS) -16866 + (NN) -10808 + (LL) 100
1D Compatibility (HY) -14400 + (ID) 4900
Total energy: -161835.0 ( -121.50 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_1JY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JY8-query.scw
PDB file :
Tito_Scwrl_1JY8.pdb
: