Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVPDEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALEEILEEYGKPIDYVINIEVDKDVLMERLTGRRICSVCGTTYHLVFNPPKTPGICDKDGGELYQRADDNEETVSKRLEVNMKQTQPLLDFYSEKGYLANVNGQQDIQDVYADVKDLLGGLKK
4JL5 Chain:A ((1-202))
MILVFLGPPGAGKGTQAKRLAKEKGFVHISTGDILREAVQKGTPLGKKAKEYMERGELVPDDLIIALIEEVFP---KHGNVIFDGFPRTVKQAEALDEMLEKKGLKVDHVLLFEVPDEVVIERLSGRRINPETGEVYHVKYNPPPPGVK-------VIQREDDKPEVIKKRLEVYREQTAPLIEYYKKKGILRIIDASKPVEEVYRQVLEVI-----
General information:
TITO was launched using:
RESULT:
Template:
4JL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84278 for 1573 contacts (-53.6/contact) +
2D Compatibility (PS) -21967 + (NN) -11427 + (LL) -400
1D Compatibility (HY) -18800 + (ID) 4600
Total energy: -141472.0 ( -89.94 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_4JL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4JL5-query.scw
PDB file :
Tito_Scwrl_4JL5.pdb
: