Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLVIVIHPNLE--TSVVNKTWMNRLKQE-KDITVHDLYGEY--PN------------------------------FIIDVEKEQQLLLDHERIVFQFPMYWYSSPALLKQWEDDVLTHGWAYGTG----GTKLHGKELLLAISLGAQESDYQAGGEYNITISELIR-PFQVTANYIGMRFLPAFTQYGTLHLSKEDVKNSAERLVDYLKAEH
4FGL Chain:A ((6-216))KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLVIFQFPLYWFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGGTAEMYTKTGV-NGDSRYFLWPLQHGTLHFCGFKVLAPQISFAPEIASEEERKGMVAAWSQRLQT--


General information:
TITO was launched using:
RESULT:

Template: 4FGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 721 2347 3.25 13.72
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 3.25
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.549

(partial model without unconserved sides chains):
PDB file : Tito_4FGL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FGL-query.scw
PDB file : Tito_Scwrl_4FGL.pdb: