Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASLTFEHVKKSYHSQLTVKDFDLDVKDKELLVLVGPSGCGKSTTLRMVAGLESISEGNLLIDGERVN----DLPPKERDIAMVFQNYALYPHMTVFDNMAFGLKLRKMAKQEIAERVHAAARILEIEHLLKRKPKALSGGQRQRVALGRSIVREPKVFLMDEPLSNLDAKLRVTMRTEISKLHQRLEATIIYVTHDQTEAMTMGDRIVVMNEGEIQQVAKPHDIYHYPANLFVAGFIGSPGMNFLKGIIEQQHGELFFTNSSIRLHIPEEKAKRLKEKGYAGEQMIAGVRPEHITQMTGNDQLFDSVFQANVEVNENLGSELIVHVMAGDERLKVRLDGNTRIDAGDSIQLSVKMDHVVFFDAETEEAVY
3FVQ Chain:A ((2-349))TAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIIGASGCGKTTLLRCLAGFEQPDSGEISLSGKTIFSKNTNLPVRERRLGYLVQEGVLFPHLTVYRNIAYGLGNGKGRTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRAALARALAPDPELILLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYRQPADLDAALFIGE--GIVFPAALNADGTAD-CR--LGRLPVQ--------SGAPAGTRGTLLIRPEQYSLHPHSA--PAASIHAVVLKTTPKARHTEISLRAGQTVLTLNL-----LSDGISAVLHLDGPALFFPG--------


General information:
TITO was launched using:
RESULT:

Template: 3FVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1602 -15781 -9.85 -46.55
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -9.85
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_3FVQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FVQ-query.scw
PDB file : Tito_Scwrl_3FVQ.pdb: