Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPTDRRVRADAARNRARVLEVAYQTFAADGLSVPVDEIARRAGVGAGTVYRHFPTKEALFQAVIADRMHRIIDKG-HALLKSKHPGDALFAFLRSMVLQWGATDRGLVEALAGVGIEISSAAPEAEADFLDLLTDLLRAAQRAGTVRPDVDVLEVKTLLVGCQAMQSYNAELAAKVTDVALDGLRANRK
2QWT Chain:A ((4-182))
------PLRADAARNRARVLEVAYDTFAAEGLGVPMDEIARRAGVGAGTVYRHFPTKQALVVAVAEDRVRRIVDHARTLL-AAEGPGEALFVFMRDMVRS-AAADYGLVDALVGYGLDLEVAAPGAEAAFLATLGELLAAAQRAGTVRADVDVAVIKALL------------VSERVVRVIEDGLRV---
General information:
TITO was launched using:
RESULT:
Template:
2QWT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99495 for 1206 contacts (-82.5/contact) +
2D Compatibility (PS) -18431 + (NN) -16590 + (LL) 1604
1D Compatibility (HY) -17200 + (ID) 5300
Total energy: -155412.0 ( -128.87 by residue)
QMean score : 0.637
(partial model without unconserved sides chains):
PDB file :
Tito_2QWT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QWT-query.scw
PDB file :
Tito_Scwrl_2QWT.pdb
: