Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAATGGLTPEQIIAVDGAHLWHPYSSIGREAVSPVVAVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQAL--TTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGL-PGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAP-----------QVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVS--PDIMCVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARAL-PAVTDVRVCGAIGVIECDR----PVDLAVATPAALDRGVWLRP-FRNLVYAMPPYICTPAEITQITSAMVEVARLVGSLP- |
| 1DTY Chain:A ((1-429)) | --------MTTDDLAFDERHIWHPYTSMTSPLPVYPVVSAEG----CELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAM--SHVMFGEITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWDAK-GE-ARDRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWD---ERDMVGFARLMAAHRH----EIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAE--IAPDILCLGKALTGGTMTLSATLTTREVAETISDGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARD-AEMVADVRVLGAIGVVETT-HPVN---MAALQKFFVEQGVWIRPF-GKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -309370 for 3459 contacts (-89.4/contact) +
2D Compatibility (PS) -44693 + (NN) -18829 + (LL) 1772
1D Compatibility (HY) -38000 + (ID) 9750
Total energy: -418870.0 ( -121.10 by residue)
QMean score : 0.479
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