Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAA-SHP-EVTFVGVAGLD-QVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTSR
2L5O Chain:A ((1-138))
----------------------------------------------DSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGL-PFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWR-
General information:
TITO was launched using:
RESULT:
Template:
2L5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96376 for 1011 contacts (-95.3/contact) +
2D Compatibility (PS) -14574 + (NN) -8573 + (LL) 3332
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -124541.0 ( -123.19 by residue)
QMean score : 0.647
(partial model without unconserved sides chains):
PDB file :
Tito_2L5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L5O-query.scw
PDB file :
Tito_Scwrl_2L5O.pdb
: