Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSGSLQFTVLRAVNPATDAQRESMLREPGFGKYHTDHMVSIDYAEGRGWHNARVIPYGPIELDPSAIVLHYAQEVFEGLKAYRWADGSIVSFRADANAARLRSSARRLAIP-ELPDAVFIESLRQLIAVDKAWVPGAGGEEALYLRPFIFATEPGLGVRPAT--QYRYLLIASPAGAYFKGGIAPVSVWVSTEYVRACPGGTGAAKFGGNYAASLLAQAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAIDAGFAVEERRIDIDEWQKKAAAGEITEVFACGTAAVITPVARVRHGASEFRIADGQPGEVTMALRDTLTGIQRGTFADTHGWMARLG- |
| 1A3G Chain:A ((4-308)) | --------------------------------------------KADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGPVV-FRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKN--------NLTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPW--------QGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALD--VNGYISEGAGENLFEVKDG----VLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYL------ADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A3G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -179195 for 2417 contacts (-74.1/contact) +
2D Compatibility (PS) -31795 + (NN) -16098 + (LL) 3664
1D Compatibility (HY) -17200 + (ID) 4750
Total energy: -245374.0 ( -101.52 by residue)
QMean score : 0.352
|
|
|