Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQPSTANGGFPSVVVTAVTATTSISPDIESTWKGLLAGESGIHALEDEFVTKWDLAVKIGGHLKDPVDSH--MGRLDMRRMSYVQRMGKLLGGQLWESAGSP--EVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMST-RNDEPERASRPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAGITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIR-VAGCD--QAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEID-LDVVAGEPRYGDYRYAVNNSFGFGGHNVALAFGRY |
| 3MQD Chain:A ((22-425)) | ----------MRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEE-YAE-LGFRCQVHG-APD-IDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTL-SVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVA--PSGEGAIRCMKMALSTV---TSKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197614 for 3898 contacts (-50.7/contact) +
2D Compatibility (PS) -42910 + (NN) -25148 + (LL) -92
1D Compatibility (HY) -17200 + (ID) 6600
Total energy: -289564.0 ( -74.29 by residue)
QMean score : 0.500
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