Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIKEATGDLQRAKEVIERV-GKDFLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLHKALF---IESNPIPVKWALHEMGLIPEG-IRLPLTWLSPRCHEPLRQAMRQTGVLA |
3DAQ Chain:A ((3-291)) | LFEGVGVALTTPFTN-NKVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATNDFEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGL-----DIQDQFKPIGTLLSALSVDINPIPIKALTSYLGFG-NYELRLPLVSLEDTDTKVLREAYDTFKAGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DAQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181200 for 2503 contacts (-72.4/contact) +
2D Compatibility (PS) -31811 + (NN) -21708 + (LL) 656
1D Compatibility (HY) -21200 + (ID) 5850
Total energy: -261113.0 ( -104.32 by residue)
QMean score : 0.579
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