Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDRLQIEDLLLGDGK-EVVKGALITTQYKGTLEDGTLFDSSYERGRPFQCVIGTGRVIKGWDQGLMGMKVGGKRRLFVPSHLAYGERQVGAHIKPHSNLLFEIELLEVLTRDD
3O5Q Chain:A ((18-127))
-DRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG---
General information:
TITO was launched using:
RESULT:
Template:
3O5Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53136 for 791 contacts (-67.2/contact) +
2D Compatibility (PS) -11421 + (NN) 2451 + (LL) 156
1D Compatibility (HY) -6400 + (ID) 1900
Total energy: -70250.0 ( -88.81 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3O5Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O5Q-query.scw
PDB file :
Tito_Scwrl_3O5Q.pdb
: