Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLKDKVIIITGGCQGLGRAMGEYLAGKGARLALVDLNRERLDEAVAACKAAGGDARAYVCNVADEEQVTHMVAQVASDFGAINGLVNNAGILRDGLTIKVKDGQLSKMSLAQWQSVIDVNLTGVFLCTREVAAKMIELKNEGAIVNISSIS-RA--GNMGQANYSAAKAGVAADTVVWAKELARYGIRVAGVAPGFIETEMTAGMKP--EALEKMTAGIPLKRMGKPVEIAHSVAYIFE--NDYYTGRVLELDGGLRL |
| 3AWD Chain:A ((9-259)) | LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISEV-------KAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147803 for 2150 contacts (-68.7/contact) +
2D Compatibility (PS) -26291 + (NN) -8828 + (LL) 248
1D Compatibility (HY) -16800 + (ID) 4250
Total energy: -203724.0 ( -94.76 by residue)
QMean score : 0.569
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