Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQAPLVLVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRKQYPDSPFAVVFDAKGPTFRDELFAEYKANRPSMPDDLRVQVEPLHASVRALGLPLLCVEGVEADDVIGTLARSSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSRLDVDGVKEKFGVGPELIIDFLALMGDKVDNIPGVPGVGEKTALGLLTGVGGGLEVLYASLDKVPELPIRGAKGLPAKLEENREQAFLSYQLATIKTDVELDVEIDKLYPGEPQREALIALYRELEFKNWLDDLLREAKEAGENGEAETPIQAEVDYDVVLDQAGFDAWLKKLEEAELIAFDTETTSIDAQQAQVVGVSFAVKEGEAAYVPLAHSYMGVPEQLDRDAVLRALKPLLEDPKKLKVGQHAKYDINVLANASTPIALRGVAYDTMLESYVLDSTATRHDMDSLALKYLGHS-TIRFEDIAGKGAKQLTFDQIAIEQAGPYAAEDADVTLRLHQALWQKLEAIPSLARVLTDIEMPLVPVLARIERNGALVDANLLGIQSRELGEKMVALERQAYDLAGQEFNLGSPKQLGAILYDKLGLPVLSKTATGQPSTAEAVLAELAEQDFELPKVIMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDPNLQNIP-----IRTAEGRRI---RQAFVAPQGYKLLAADYSQIELRIMAHLAKDDGLLDAFRHDLDVHRATAAEVFGVPLEDVSGDQRRSAKAINFGLIYGMSAFGLAKQIGVERKEAQAYIDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPEIHSKNGAMRKAAERTAINAPMQGTAADIMKRAMVAVDNWLQESG-LDARVILQVHDELVLEVREDLVEQVCEGIRPLMSGAA-------TLDVPLVVEAGVGSNWDEAH--- |
| 4XVK Chain:A ((1-666)) | ----------------------------------------------KKHFCDIR-------------------------HLDDWAKSQLIEMLKQAAALVITVMYTDG-----------STQLGADQTPVSS---------VRGIVVLVK--------------RQACGPVL--------EGFVSDDP----------------------CIYIQIEHSAIWD---------QEQEAHQQFARNVLFQTMKCKCPVIC---------------------FNAKDFVRIVLQFFGNDG-------------SWKHVADFIGLD-------------------------------------------------------------------------------------------------------PRIAAWLIDPSDATPSFEDLVEKYCEKSITVKVNS---------TYGNSSRNIVNQNVRENLKTLYRLTMDLCSKLKD-YGLWQLFRTLELPLIPILAVMESHAIQVNKEEMEKTSALLGARLKELEQEAHFVAGERFLITSNNQLREILFGKLKLHLLSY-----PSTSEAVLNALRDLH-PLPKIILEYRQVHKIKSTFVDGLLACM--KKGSISSTWNQTGTVTGRLSAKHPNIQGISKHPIQITTPKKILTISPRAMFVSSKGHTFLAADFSQIELRILTHLSGDPELLKLD----DVFSTLTSQWKDVPVEQVTHADREQTKKVVYAVVYGAGKERLAACLGVPIQEAAQFLESFLQKYKKIKDFARAAIAQCHQTGCVVSIMGRRRPLPRIHAHDQQLRAQAERQAVNFVVQGSAADLCKLAMIHVFTAVAASHTLTARLVAQIHDELLFEVEDPQIPECAALVRRTMESLEQVQALELQLQVPLKVSLSAGRSWGHLVPLQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243146 for 4852 contacts (-50.1/contact) +
2D Compatibility (PS) -66190 + (NN) -26986 + (LL) 20128
1D Compatibility (HY) -46800 + (ID) 9500
Total energy: -372494.0 ( -76.77 by residue)
QMean score : 0.506
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