Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNLRTDIRNVAIIAHVDHGKTTLVDELLKQSHTLDERKELEERAMDSNDIEKERGITILAKNTAVAYNDVRINIMDTPGHADFGGEVERIMKMVDGVVLVVDAYEGTMPQTRFVLKKALEQNLIPIVVVNKIDKPSA---------------RPS--------------------------------------------EVVDEVLELFIELGAD-DDQLDFPV----------VYASAINGTSSMSDDPLD-----QEKTMAPIFDTIIDHIPAPVD------------------NSEEPLQFQVSLLDYNDFVGRIGIGRVFRGTVKVGDQVTLSKLDGTTKNFRVTKLFGFFGLERKEIQEAKAGDLIAVSGMEDIFVGETVTPTDDI-EPLPVLRIDEPTLQMTFLVNNSPFAGREGKWITSRKVEERLLAELQTDVSLRVDPTDSPDKWTVSGRGELHLSILIETMRRE-GYELQVSRPEVIIKEIDGVQCEPFERVQIDTPEEYQGAIIQSLSERKGDMLDMQMVGNGQTRLIFLIPARGLIGYSTEFLSMTRGYGIMNHTFDQYLPVVQG------EIGGRHRGVLVSIENG--KATTYSIMRIEERGTIFVNPGTEVYEGMIVGENSRDNDLGVNITT-AKQMTNVRSATKDQTAVIK--TPR--------ILTLEESLEFLADDEYMEVTPESIRLRKQILNKAARDKANKKKKSAE |
| 4M1K Chain:A ((6-688)) | -EYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRI-------------------------AAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTT---KGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKA---------DQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDANVGKPQVAYRET------------ITKPVDVEGKFIRLTGGRG---------QYGHVKIKVEPLPRG---SGFEFVNAIVGGVIPKEYIPAVQKGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMR-----VEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125323 for 4267 contacts (-29.4/contact) +
2D Compatibility (PS) -57710 + (NN) -13508 + (LL) 4392
1D Compatibility (HY) -23200 + (ID) 7350
Total energy: -222699.0 ( -52.19 by residue)
QMean score : 0.321
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