Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSGKTYVASVLEKVKKQNEHEEEFLQAVEEVFESLVPVFDKYPQYIEENLLERLVEPERVISFRVPWVDDKGQVQVNRGYRVQFSSAIGPYKGGLRFHPTVTQSIVKFLGFEQIFKNSLTGLPIGGGKGGS-NFDPKGKSDNEVMRFTQSFMTELQKYIGPDLDVPAGDIGVGGREIGYLYGQYKRLNGYQN----GVLTGKGLTYGGSLVRTEATGYGAVYFAKEMLAARG--QDLTGKVALVSGSGNVAIYATEKLQEL-GATVVAVSDSSGYVYDPDGIDLETLKQIKEVERARIVKYTEKHPKA-NFTPADQGSIWSIKADLAFPCATQNELDEEDAKLLVENGVLAVTEGAN--MPSTLGAIKVFQKAGVAFGPAKAANAGGVAVSALEMAQNSSRRA--WTFEEVDQELQRIMKTIFVNASEATDEFGDSGNLVLGANIAGFLKVAQAMSAQGIV-- |
| 1BGV Chain:A ((1-449)) | ----SKYVDRVIAEVEKKYADEPEFVQTVEEVLSSLGPVVDAHPEYEEVALLERMVIPERVIEFRVPWEDDNGKVHVNTGYRVQFNGAIGPYKGGLRFAPSVNLSIMKFLGFEQAFKDSLTTLPMGGAKGGSD-FDPNGKSDREVMRFCQAFMTELYRHIGPDIDVPAGDLGVGAREIGYMYGQYRK-IVG--GFYNGVLTGKARSFGGSLVRPEATGYGSVYYVEAVMKHE-ND-TLVGKTVALAGFGNVAWGAAKKLAE-LGAKAVTLSGPDGYIYDPEGITTEEKINYMLEMRASGRNKVQDYADKFGVQFFPGEKPWGQKVDIIMPCATQNDVDLEQAKKIVANNVKYYIEVANMPT-TNEALRFLMQQPNMVVAPSKAVNAGGVLVSGFEMSQNSER--LSWTAEEVDSKLHQVMTDIHDGSAAAAERYGLGYNLVAGANIVGFQKIADAMMAQGI-AW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126589 for 3944 contacts (-32.1/contact) +
2D Compatibility (PS) -46771 + (NN) -20753 + (LL) 616
1D Compatibility (HY) -33600 + (ID) 11650
Total energy: -238747.0 ( -60.53 by residue)
QMean score : 0.551
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