Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYRILVVEDDEDIGDLLEESLTRAGYEVLRAKDGKRALQLVN-DSLDLVILDIMMPGISGIETCQHIRKSSNVPILFLTARSSTLDKTEGLLAGGDDYMTKPFSEEELHARVIAQLRRYTIYQEKKEQEETFLIGGKLRVSEEFNEVWKEEKQIKLSDLEYRILKLLMNKRNKIFSAQNIYESVWGQPYFYCSNNTVMVHIRKLRSKIEDDPARPVYIKTEWGRGYRFGAS
3Q9S Chain:A ((5-212))---RILVIEDDHDIANVLRMDLTDAGYVVDHADSAMNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVLTARDTVEEKVRLLGLGADDYLIKPFHPDELLARVKVQLRQRTSESL---------SMGDLTLDPQKRLVTYKGEELRLSPKEFDILALLIRQPGRVYSRQEIGQEIWQG-RLPEGSNVVDVHMANLRAKLRDLD-GYGLLRTV----------


General information:
TITO was launched using:
RESULT:

Template: 3Q9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 895 -36211 -40.46 -174.93
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -40.46
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_3Q9S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q9S-query.scw
PDB file : Tito_Scwrl_3Q9S.pdb: