Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIILMGLPGAGKGTQASEIVKKFPIPHISTGDMFRKAIKEETELGKEAKSYMDRGELVPDEVTVGIVKERISEDDAKKGFLLDGFPRTIEQAEALNNIMSELDRNIDAVINIEVPEEELMNRLTGRRICESCGTTYHLVFNPPKVEGICDIDGGKLYQREDDNPETVANRLSVNIKQSKPILDFYDQKGVLKNIDGSKDISDVTKDVIDILDHL
1QF9 Chain:A ((7-190))
NVVFVLGGPGSGKGTQCANIVRDFGWVHLSAGDLLRQEQQSGSKDGEMIATMIKNGEIVPSIVTVKLLKNAIDA-NQGKNFLVDGFPRNEENNNSWEENMKDF-VDTKFVLFFDCPEEVMTQRLLKRGESSG---------------------------RSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYNDVENLFK--
General information:
TITO was launched using:
RESULT:
Template:
1QF9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53009 for 1444 contacts (-36.7/contact) +
2D Compatibility (PS) -19457 + (NN) -5844 + (LL) 940
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: -92320.0 ( -63.93 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_1QF9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QF9-query.scw
PDB file :
Tito_Scwrl_1QF9.pdb
: