Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQHHKVAIIGAGAAGIGMAITLKDF--GITDVIILEKG-TVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIA--TTTETYHADYIFVATGDYNF-PKKP-F-K-YGIHYSEIEDF--D-NFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDATKNPIVQQLFVTTN-QDIKLTTHDESTRYPNIFMIGATVENDNAK------LCYIYKFRARFAVLAHLLTQREGLPAKQEVIENYQKNQMYLDDYSCCEVSCTC |
| 3OC4 Chain:A ((3-314)) | ---LKIVIIGASFAGISAAIASRKKYPQA-EISLIDKQATVGYLSG----------------------------------------------RYITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLS--AVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKYFD------KEMVAEVQKSLEKQ-AVIFHFEETVLGIEETANGIVLE-TSEQEI-SCDSGIFALNLHPQLAY-LDKKIQRNLDQTIAVDAYLQ-TSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLEEK-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -180647 for 2167 contacts (-83.4/contact) +
2D Compatibility (PS) -29850 + (NN) -13144 + (LL) 4908
1D Compatibility (HY) -12400 + (ID) 2650
Total energy: -233783.0 ( -107.88 by residue)
QMean score : 0.468
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