Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSHYIELTEENFESTI--KKGVALVDFWAPWCGPCKMLSPVIDELASEYEGKAKICKVNTDEQEELSAKFGIRSIPTLLFTKDGEVVHQLVGVQTKVALKEQLNKLLG
2I4A Chain:A ((4-106))
---TLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWVESAQ-
General information:
TITO was launched using:
RESULT:
Template:
2I4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63373 for 723 contacts (-87.7/contact) +
2D Compatibility (PS) -10712 + (NN) -2700 + (LL) 400
1D Compatibility (HY) -8800 + (ID) 1950
Total energy: -87135.0 ( -120.52 by residue)
QMean score : 0.734
(partial model without unconserved sides chains):
PDB file :
Tito_2I4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I4A-query.scw
PDB file :
Tito_Scwrl_2I4A.pdb
: