Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGM-TADMLREEIQKTKALTDKAFGVNLMLMMTN----IAELTEVIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVG--ETTTMALLPQIVDAVTIPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRLEEEN--ADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKKVIAGLELK--- |
2GJL Chain:A ((3-326)) | VFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -209230 for 2783 contacts (-75.2/contact) +
2D Compatibility (PS) -33743 + (NN) -12844 + (LL) 0
1D Compatibility (HY) -16000 + (ID) 5450
Total energy: -277267.0 ( -99.63 by residue)
QMean score : 0.512
|
|
|