Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGM-TADMLREEIQKTKALTDKAFGVNLMLMMTN----IAELTEVIIEEKVGIVTTGAGTPKTFMPIWKEAGIIVIPVVPSVMIAKRMEKMGADAVIAEGTEAGGHVG--ETTTMALLPQIVDAVTIPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMVTGRKAGAPVRSIKNKMIKEYIRLEEEN--ADRDTLEELTLGSLRKAVQEGDTDNGSVMAGQIAGLITEIKPCKDVIEEMMTDAKKVIAGLELK---
2GJL Chain:A ((3-326))VFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLA


General information:
TITO was launched using:
RESULT:

Template: 2GJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -209230 for 2783 contacts (-75.2/contact) +
2D Compatibility (PS) -33743 + (NN) -12844 + (LL) 0
1D Compatibility (HY) -16000 + (ID) 5450
Total energy: -277267.0 ( -99.63 by residue)
QMean score : 0.512

(partial model without unconserved sides chains):
PDB file : Tito_2GJL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GJL-query.scw
PDB file : Tito_Scwrl_2GJL.pdb: