Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVE-DGK-----LVADDKAGTELLTFMSELQKNKLLLAS----KATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLK-FVYNDDKNDLKFLETTNL-IPARDDATENETFTAFFKENPELEVYAANVPYSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
| 3WOA Chain:A ((24-416)) | EKKKNELGLSQ-ESVADKMGMGQSGSGM---KIEEGKLVIWINGDK-GYNGLAEVGKKFEKD-TGIKVTVEHP---DKLEEKFPQVAATGDGPDIIF-WAHDRFGGYAQSGLLAEITPDKAF----QDKLYPFTWDAVRY-NGKLIAYPIAVEALSLIYNKDLLPN-----PPKTWEEIPALDKELKAKGKS--ALMFN--LQEPYF--T---WP-LIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTS----K--VNYGVTVLPTFKGQP----SKPFVGVLSAGINAASPN--KELAKEFLENYLLTDE-GLEAVNKDKPLGAVALKSYE-EE-L----AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRT-AVINAASGRQTVDEALKDAQT-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53853 for 3246 contacts (-16.6/contact) +
2D Compatibility (PS) -40847 + (NN) -16076 + (LL) 3236
1D Compatibility (HY) -6400 + (ID) 4000
Total energy: -117940.0 ( -36.33 by residue)
QMean score : 0.365
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