Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTYVEMKDVSKYYQMGENVVTANDKITFGIKKGEFVVIVGPSGAGKSTVLNILGGMDSASEGKIMVDGQDIAQYNAKQLTKYRRTDVGFVFQFYNLVPNLTAKENVELAAQI-----APNALDAETVLTQVGLSHRLDNFPAQLSGGEQQRVAIARALAKAPKLLLCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHN-TAITPIADRIIEINNAKVR------SIKENPEPMSIDDLEW------------------------------------------------------------------------------------------------- |
3TUZ Chain:H ((23-362)) | -HMIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQ-IGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEVKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127957 for 1848 contacts (-69.2/contact) +
2D Compatibility (PS) -25784 + (NN) -14550 + (LL) 132
1D Compatibility (HY) -20000 + (ID) 3900
Total energy: -192059.0 ( -103.93 by residue)
QMean score : 0.548
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