Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDERIISSETVDAEEVSFETSLRPQNLSQYIGQDKVKNNLTVFIEAATLRNEALDHVLLYGPPGLGKTTLAMVIASEMGS-----QIKTTSGPAIERPGDL----ATILTSL----EPGDVLFIDEIHRLSRAIEEILYPAMEDYCLDIVIGTGPTARSVRLDLPPFTLIGATTRAGLLSAPLRDRFGVIDHLEFYTEEQLTEIVLRTSNILDTKIDDLGAREIARRSRGTPRIANRLLKRVRDFAQVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTIIQSFRGGPVGLDTIAASIGEERETIEDMQEPYLLQIGFLQRTPRGRIVTETAYNHLGISYEKEV |
1IQP Chain:A ((7-232)) | ---------EVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKT-----GSMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS------------------SNVRFILSCNYSSKIIEPIQSRCAI-FRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDK-----KITDENVFMVAS------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93283 for 1650 contacts (-56.5/contact) +
2D Compatibility (PS) -22676 + (NN) -4009 + (LL) 8156
1D Compatibility (HY) -8800 + (ID) 2000
Total energy: -122612.0 ( -74.31 by residue)
QMean score : 0.476
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