Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---LDKTKRKMIYETFMLILILLSLALLPYRNNFTFILNWIIWVIFTLDYLVRLYRADNKWHYV--KTHPFQLIAIIPFYGGF-----RAARIVSFVHLLSITAMGRRYIVPIYSFFRSNGLNRFLMIFVLLVIIIPVPMVFIE------PEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDLTKEEIAVVEQFLTLRKKELADENTKSDSE
3BEH Chain:A ((7-228))
LRIYAPLNAVLAAPGLLAVAALTIPDMSGRSRLALAALLAVIWGAYLLQLAATLLKRRAGVVRDRTPKIAIDVLAVLVPLAAFLLDGSPDWSLYCAVWLLKPLRDSTFFPVLGRVLANEARNLIGVTTLFGVVLFAVALAAYVIERDIQPEKFGSIPQAMWWAVVTLSTTGYGDTIPQSFAGRVLAGAVMMSGIGIFGLWAGILATGFYQEVRRGDFVRNWQ-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3BEH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132533 for 1312 contacts (-101.0/contact) +
2D Compatibility (PS) -20402 + (NN) 7260 + (LL) 3412
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -151613.0 ( -115.56 by residue)
QMean score : 0.134
(partial model without unconserved sides chains):
PDB file :
Tito_3BEH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BEH-query.scw
PDB file :
Tito_Scwrl_3BEH.pdb
: