Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQDTFPLAIGVLKGALPFMADLIKHIDTYLE------------MDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
3OZF Chain:A ((57-243))
---KYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQ-STGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKK-
General information:
TITO was launched using:
RESULT:
Template:
3OZF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135387 for 1339 contacts (-101.1/contact) +
2D Compatibility (PS) -18926 + (NN) -5622 + (LL) 644
1D Compatibility (HY) -17600 + (ID) 2800
Total energy: -179691.0 ( -134.20 by residue)
QMean score : 0.550
(partial model without unconserved sides chains):
PDB file :
Tito_3OZF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OZF-query.scw
PDB file :
Tito_Scwrl_3OZF.pdb
: