Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNRDIVWHEASITKEEYQQKNKHKSSILWLTGLSGSGKSTIANAAARELF-EQGYQVIVLDGDNIRHGLNRDLGFSDEDRKENIRRIGEVAKLFVQQGTIVITAFISPFREDRQQVRELVEAGEFNEVYIKCDLDICEQRDPKGLYKKARNGEIPFFTGIDSPYEEPEAPELVLDSGQHDREACKNQLIEFVKQKLS-----
1D6J Chain:A ((8-210))--------HASALTRSERTELRNQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHE------------------VATPGEETGLPFVEVYVDVPVEAPYEAPANPEVHVKNYELPVQDAVKQIIDYLDTKGYLPAKK


General information:
TITO was launched using:
RESULT:

Template: 1D6J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 814 -54263 -66.66 -317.33
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -66.66
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_1D6J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D6J-query.scw
PDB file : Tito_Scwrl_1D6J.pdb: