Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISFIFAMDANRLIGKDNDLPWH-LPNDLAYFKKITSG-------HSIIMGRKTFESIG---RPLPNRKNIVVTSAPDSEFQGC-TVVSSLKDVLD--IC----SGPEECFVIGGAQLYTDLFP--YADRLYMTKIHHEFEGDRHFPEFDESNWKLVSSEQGT----KDEKNPYDYEFLMYEKKNSSKAGGF
1KMV Chain:A ((3-186))SLNCIVAVSQNMGIGKNGDLPWPPLRNEFRYFQRMTTTSSVEGKQNLVIMGKKTWFSIPEKNRPLKGRINLVLSRELKEPPQGAHFLSRSLDDALKLTEQPELANKVDMVWIVGGSSVYKEAMNHPGHLKLFVTRIMQDFESDTFFPEIDLEKYKLLP-EYPGVLSDVQEEKGIKYKFEVYEKND-------


General information:
TITO was launched using:
RESULT:

Template: 1KMV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 708 24662 34.83 154.13
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 34.83
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.594

(partial model without unconserved sides chains):
PDB file : Tito_1KMV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KMV-query.scw
PDB file : Tito_Scwrl_1KMV.pdb: