Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELFKYMEKYDYEQLVFCQDEQSGLKAIIAIHDTTLGPALGGTRMWTYENEEAAIEDALRLARGMTYKNAAAGLNLGGGKTVIIGDPRKD---KNEEMFRAFGRYIQGLN--GRYITAEDVGTTVEDMDIIHDE---------TDYVTGISPAFGSSGNPSPVTAYGVYRGMKAAAKAAFGTDSLEGKTIAVQGVGNVAYNLCRHLHEEGAN-LIVTDINKQSVQR-------A---VEDFG-------ARAVDPDDIYSQDCDIYAPCALGATINDDTIKQLKAKVIAGAANNQLKETRHGDQIHEMGIVYAPDYVINAGGVINVADELY-GYNAERALKKVEG-IYGNIERVLEISQRDGIPAYLAADRLAEERIERMRRSRSQFLQNGHSVLSRR
4XGI Chain:A ((73-435))----------------------AHFEGYRVQHNVSRGPGKGGVRYHQDVTLS----EVMALSAWMSVKNAAVNVPYGGAKGGIRVDPRKLSRGELERVTRRYTSEIGIIIGPNTDIPAPDVNTNEQIMAWMMDTYSMNQGQTATGVVTGKPISLGGSLGRKEATGRGVFVVGCEAAKKK-G-VEIEGARIAVQGFGNVGGIAAKLFQEAGAKVIAVQDHTGTIHQPAGVDTAKLLDHVGRTGGVAGFEGAEPMPNDEFWTVETEILIPAALENQITEKNASKIRTKIIVEGANGPT-TTAADDILSANGVLVIPDVIANAGGVTVSYFEWVQ-WTEDEINHRLERVMREAFAGVWAVAEEHKVSVRTAAFIVACKRILMAREMRGLY-----------


General information:
TITO was launched using:
RESULT:

Template: 4XGI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1935 58868 30.42 182.25
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : 30.42
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_4XGI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XGI-query.scw
PDB file : Tito_Scwrl_4XGI.pdb: