Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHQIVTTQYGKVKGTTENGVHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDATAYGSICPQPSDLLSLS----YTELPRQSEDCLYVNVFAPDTP-SKNLPVMVWIHGGAFYLGAGSE-PLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFN--EAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTK-E--QAASTSAAFLQVLGINEGQLDKLHTVSAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKAIAEGAASGIPLLIGTTRDEGYLFFTPDSDVHS-QETLDAALEYLLGK---PLAEKVADLYPRSLESQIHMMTDLLFWRPAVAYASAQSHY-APVWMYRFDWHPKKPPYNKAFHALELPFVFGNLDGLERMAKAEITDEVKQLSHTIQSAWITFAKTGNPSTE-AVNWPAYHEETRETLILDSEITIENDPESEKRQKLFPSKGE
5A2G Chain:A ((9-500))-NLPVVETKAGKLRGYQWEGTYIFKGIRYARA----NRFQLPEEVEPWEGVKEAASYGFVCPMLTRDHPQGELLVPHRYWPQDEDCLSLNIWSQSLDRSAKKPVMFWIHGGAFSMGSSIEQKAYNGENMSRYGDVVVVTVNHRLNILGYLDLSPYGERYAGSANAGQADLVAALKWVRDNIEAFGGDPDNVTIFGQSGGGMKVSGLMQTPEADGLFHRAMIMSGVAGDVLPYSTGDSRPLIQAMLKELGLAEQEAGRLETVPYYDLAAAYNRVSPAIARAGGYIGCTPRPDDFYKGEGPAVGFT-DHAKTIPVMVGTVFGEFAMMPLPFNKETISEAELDEILDKRFQGHGKELKTVFAEAYPGK-SPVDLLTLDTIFRGPTKEFVRSLAAAGGSVYSYLFALEFPYQNQKTAWHCSDIPFIFHNTELVPVT--NI-PEISDKLEKQMFDAVIHFVETGDPNHLGIPQWPVSTEDREATMIFDRVCTVRFNFDDYLLELYKK----


General information:
TITO was launched using:
RESULT:

Template: 5A2G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2819 -3324 -1.18 -7.00
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -1.18
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_5A2G.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5A2G-query.scw
PDB file : Tito_Scwrl_5A2G.pdb: