Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKG------------KQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTPRQTTADGFEMQFGTNHLGHFALTGLLIDRLLPVAGSRVVTISSVGHRIRAAIHFDDLQWERRYRRVAAYGQAKLANLLFTYELQRRLAPGGTTIAVASHPGVSNTEVVRNMPRPL--VA----------VA-----AILAPLMQDAELGALPTLRAATDPA-VRGGQYFGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVSEELTGVVYPVG |
| 3PXX Chain:A ((3-282)) | ------GSMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTS--GASIITTGSVAGLI-AAAQPP------QGPGGAGYSYAKQLVDSYTLQLAAQLAPQ-SIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88019 for 2161 contacts (-40.7/contact) +
2D Compatibility (PS) -26994 + (NN) -15912 + (LL) 4168
1D Compatibility (HY) -2400 + (ID) 2700
Total energy: -131857.0 ( -61.02 by residue)
QMean score : 0.441
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