Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAVAAGALVVETDSFRLRLLDGLVASIGERGYRATTVSDIVRHARTSKRTFYDRFTSKEQCFLE-LLLADNETLGNSIRAAVDPNADWHDQIRQAVEAYVTHIESRPAVTLSWI---REFPSLGAAAYPVQRRGMEQLTSLLIELSASPGFRRANLPPLNVPLAVILLGGLRELT-ALTVEDGQPIRNIVEPAVDASIALLGPRS-------
3C2B Chain:A ((14-216))
-------------SPRQNAVLDQALRLLVEGGEKALTTSGLARAANCSKESLYKWFGDRDGLLAAMITFQQSKVRTFEKAGDRVSAPQLADHLEVFAHDLLDVLAGDVSLALNRLAIGQASRKLGDLLLERGRRQIDRRARGLIEAGRRSGYLRFDDAEEAYRSFYGLIVSDLHVRMLLGEAPDKDFSARAKKAVVAFLTLYGTEKVHSELGG
General information:
TITO was launched using:
RESULT:
Template:
3C2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59488 for 1326 contacts (-44.9/contact) +
2D Compatibility (PS) -19927 + (NN) -5465 + (LL) 1572
1D Compatibility (HY) -4400 + (ID) 1550
Total energy: -89258.0 ( -67.31 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_3C2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C2B-query.scw
PDB file :
Tito_Scwrl_3C2B.pdb
: