Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVTPNAGCVDVVIVGAGISGLGAAYRIIERNPQLTYTILERRARIGGTWDLFRYPGVRSDSSIFTLSFPYEPW-----TREEGIADGAHIREYLTDMAHKYGIDRHIEFNSYVRAADWDSSTDTWTVTFEQNGVHKHYRSRFVFFGSGYYNYDEGYTPDFGGIEKFGGAVVHPQHWPED-LDYTGKKIVVIGSGATAVTLIPSLTDRAEKVTMLQRSPTYLISASKYSTFAAV-------------VRKA---------LPPKTSH-----L----IVRMYNA--LLEAVFWFLSR--KTPVFVKWLLRRTAIKNLPEGYDIETHFTP-RYNPWDQRLCLIPDADLYNAITSGRAEVVT---DHIDHFDATGIALKSGGHLDADIIVTATGLQLQAL-G-GAAIS-LDGVEID--PR-DRFVYKAHMLEDVPNLFWCVGYTN----ASWTLRADMTARATAKLLAHMAAHGHTRAAPHLGDEPMDEKPSWDIQAGYVKRAPYALPKSGTKRPWNVRQNYLADAIDYRFDRIEEAMVFGAA |
| 4AP3 Chain:A ((20-515)) | -------TSYDVVVVGAGIAGLYAIHRFRSQ--GLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG---DEVSARFLVVAAGPL--SNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAG----DDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVV-DDPAVAELLTPKDHAIGAKRIV--LDSGYYETYNRDNVELVDLRSTPIVGMDETGIVT-TGAHYDLDMIVLATGFDAMTGSLDKLEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYLDARGAAGIEGTPE----AVADWVEECRNRAEAS----LLN-SANSWYLGA----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -238720 for 3468 contacts (-68.8/contact) +
2D Compatibility (PS) -45917 + (NN) -17449 + (LL) 2964
1D Compatibility (HY) -19200 + (ID) 5650
Total energy: -323972.0 ( -93.42 by residue)
QMean score : 0.461
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