Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRKPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALKHGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVASAADAQEVCAAIRKELASLASPRIADTVRVLYGGSVNAKNVGDIVAQDDVDGGLVGGASLDGEHFATLAAIAAGGPLP
4MKN Chain:A ((17-267))SSAKFFVGGNWKCNGSVANVAKLVDELNAGT---IPRGVDVVVAPPFIYIDYVMQHLD--RDKYQLSAQNAWIGGNGAFTGEVSAEQLTDFGVPWVILGHSERRSLFGESNEVVAKKTSHALAAGLGVIACIGETLEQRNSGSVFKVLDAQMDALVDEV--KDWTKVVLAYEPVWAIGTGVVASPEQAQEVHAYLRQYCAKKLGAAVADKLRIIYGGSVSDTNCKDLSKQEDIDGFLVGGASLKGAAFVTICNAAGPK---


General information:
TITO was launched using:
RESULT:

Template: 4MKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -152929 for 2143 contacts (-71.4/contact) +
2D Compatibility (PS) -28208 + (NN) -18173 + (LL) -184
1D Compatibility (HY) -18400 + (ID) 5000
Total energy: -222894.0 ( -104.01 by residue)
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_4MKN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MKN-query.scw
PDB file : Tito_Scwrl_4MKN.pdb: