Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRHFLRDDDLSPAEQAEVLELAAELKKDP--V-SRRPLQGPRGVAVIFDKNSTRTRFSFELGIAQLGGHAVVVDSGSTQLGRDETLQDTAKVLSRYVDAIVWRTFGQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAERKG--ALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTADAHAAAAGADVLVTDTWTSMGQENDG-LDRVKPFRPFQLNSRLLAL-ADSDAIVLHCLPAH------------------RGDEITDAVMDGPASAVWDEAENRLHAQKALLVWLLERS |
| 1DUV Chain:G ((4-333)) | YHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTG-KNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYASVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLREYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163571 for 2737 contacts (-59.8/contact) +
2D Compatibility (PS) -34129 + (NN) -25412 + (LL) -168
1D Compatibility (HY) -26400 + (ID) 6050
Total energy: -255730.0 ( -93.43 by residue)
QMean score : 0.535
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