Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTHSRLIGALTVVAIIVTACGSQPKSQPAVAPTGDAAAATQVPAGQTVPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAA-SHPEVTFVGVAGL------------------DQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALTSR
3HA9 Chain:A ((35-187))
-------------------------------------------SEEVLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGD-PSWIMVMDDGSLVEKFNVRSIDYIVIMDKSSNVLYAGTT-PSLGELESVIKSV---
General information:
TITO was launched using:
RESULT:
Template:
3HA9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85725 for 969 contacts (-88.5/contact) +
2D Compatibility (PS) -14391 + (NN) -3782 + (LL) 3224
1D Compatibility (HY) -11600 + (ID) 1500
Total energy: -113774.0 ( -117.41 by residue)
QMean score : 0.530
(partial model without unconserved sides chains):
PDB file :
Tito_3HA9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HA9-query.scw
PDB file :
Tito_Scwrl_3HA9.pdb
: