Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFKKLA-NSQRPRAMFITCADSRIVP--ELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAIEYAVLALGVHHIIVCGHSDCGAMRAVLDPQTLERMPTVKAWLRHAEVARTVVADNCDCGASHDTLGVLTEENVVAQLDHLRTHPSVASRLASGQLFIHGWVYDIESAQIRAYDAKQGRFLPLDGEHPVPMATPAPRYLSS
1G5C Chain:A ((2-168))
--------------------IIKDILRENQDFR----------FRDLSDLKHSPKLCIITCMDSRLIDLLERALGIGRGDAKVIKNAGNIVDD------GVIRSAAVAIYALGDNEIIIVGHTDCGMARLDE--------DLIVSRMRELGVEEEVI-ENFSI--DVLNPVGDEEENVIEGVKRLKSSPLIPES-----IGVHGLIIDINTGRLKPLYLDE------------------------
General information:
TITO was launched using:
RESULT:
Template:
1G5C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92509 for 1114 contacts (-83.0/contact) +
2D Compatibility (PS) -17161 + (NN) -6094 + (LL) 3356
1D Compatibility (HY) -11600 + (ID) 2500
Total energy: -126508.0 ( -113.56 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_1G5C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G5C-query.scw
PDB file :
Tito_Scwrl_1G5C.pdb
: