Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHQRIASIGLGLTLALGGSAQAAGQLNVVSWSGYFSPQLL----EKFEKESGIRVTVDSYDSNETLLAKLKQ-GGAGYDVAIPSQQFV-PILVKEALLERFDPAAEPYYANLLDNLKKPAWDPEGAYSVPFIWGTTSVVLDGARYAGPADSYAVLYQPPE--ELRGRINMFDSVSEVVDMASLY-LGIPLCSADPKQMQRVLELLKA-QKPFVKTYSSKAGSIRENLAAGEVDMSMFWGGSSMRARELKPS-LKYLYPKEGVLAWVDNL-VIPRGSRNPDNARRFI-AFLAQPENAALTQNF-LKHQSPVKGVEPYLDASLKDAPELHVPAGTRVVFSQTCGEDAI-RLADRLWTNLMR |
| 3PU5 Chain:A ((3-324)) | --------------------LADDHIYVTSSGGSFLENVRKHMAEPFEKQSGVKVTLVPGTNPAHALKILSSRGTPPYDVAAFGG-NDMYRLIRAKKLAQVDEKSVPSLADVPEKFK----ADWEGCGSLYDYSSVGIAYRPDKIQGGVKSWKEFVERTVAGEFGKQVFFNNLSSNVRGAEVLSMFGKIY-GSGYGDIEASIATLERMKPHIFKFFT-AFNDPVVLLTSGEGAIGPGWDGRTFIAEDSTKGMVKWVDPTEGA-VSSGPVMAVVKGGK--EDLAKAFMNYALGEEAQKAFCEAMYY-------GAVNRKVQYSEKLKHRLPSIDSVQLVDTALLIKNMSALLDLWNKRIA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -91782 for 2545 contacts (-36.1/contact) +
2D Compatibility (PS) -33345 + (NN) -17626 + (LL) 1732
1D Compatibility (HY) -4800 + (ID) 2600
Total energy: -148421.0 ( -58.32 by residue)
QMean score : 0.384
|
|
|