Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MARPLAMIAALGENRAIGIDNRLPWRLPADLKHFKAMTLGKP-------------VIMGRKTWDSL---GRPLPGRLNLVVSR----------------QAGLALEGAEVFASLDAALARAEAWAQAEDADELMLIGGAQLYAEALP-----RAARLYLTRV-GLAPEGDAFFPEIDG---------AAWRLASSIEHAAADDAPAYAFEVWERR- |
| 3RG9 Chain:A ((23-240)) | RPPLRPFSVVVASDEKGGIGDGGTIPWEIPEDMQYFRRVTTNLRGKNVKPSPSKRNAVVMGRKTWDSLPPKFRPLSNRLNVVLSRSATKEQLLAGIPDPIKRAEAANDVVAVNGGLEDALRMLVSKEHTSSIETVFCIGGGTIYKQALCAPCVNVLQAIHRTVVRPASNSCSVFFDIPAAGTKTPEGLELVRESITDERVSTGAGGKKYQFEKLVPRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -91433 for 1261 contacts (-72.5/contact) +
2D Compatibility (PS) -17997 + (NN) -2786 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -123166.0 ( -97.67 by residue)
QMean score : 0.459
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