Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRRLENRVALVTGAGQGIGRAIAECFAAEGARVLLATRTASR-GQAVLEAIRLGGGTAELLAVDLSEYDAARRAVSATLERFGQLDILLHNAAAFPQCALAELDEGTLERTLAVNLKSCFRLTQAALPALRRS-VAGRVLVTSSVTGPRTAIPGLSHYAASKAGVNGFIRAAALELAGDGITVNGVEPGLVATPALGSLGDA----AALAAHIPLGRVGQPLDIAHAMLFLASDEASYITGQTLVVDGGALLPENGGLA
1GEE Chain:A ((2-252))
YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEK-IPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYVTGITLFADGGMTL-------
General information:
TITO was launched using:
RESULT:
Template:
1GEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172961 for 2108 contacts (-82.0/contact) +
2D Compatibility (PS) -26969 + (NN) -10548 + (LL) -40
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -229818.0 ( -109.02 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_1GEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1GEE-query.scw
PDB file :
Tito_Scwrl_1GEE.pdb
: