Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIFFIDNFDSFSYNLVYELECLGYEVAVYQNDIDPSYLMGLMNEEPKTPLLFISPGPGNPNSS----GNLLKIIAM-AKKKFPILGVCLGLQALAQSYGAKIIRSKEIVHGKATTIAL-------KKHAVFKGLGESMVVGRYHSLMASGLPKNLEVIAEHDNIPMAIVNEEDKILAYQFHPESIMTLQGRALLEQSVGFLRELS
1Q7R Chain:A ((24-212))
MKIGVLGLQG-AVREHVRAIEACGAEAVIVKKSE---QLEG-------LDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDEPHLGLMDITVERNSFGRQRESFEAELSIKGVGDGFVGVFIRAPHIVEAGDGVDVLATYNDRIVAARQ--GQFLGCSFHPELTDD---HRLMQYFLNMVKEAK
General information:
TITO was launched using:
RESULT:
Template:
1Q7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141163 for 1493 contacts (-94.5/contact) +
2D Compatibility (PS) -18671 + (NN) -340 + (LL) 496
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: -165778.0 ( -111.04 by residue)
QMean score : 0.397
(partial model without unconserved sides chains):
PDB file :
Tito_1Q7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q7R-query.scw
PDB file :
Tito_Scwrl_1Q7R.pdb
: