Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRGSLVSWRAFHGCDSAEELPRVSPRFLRAWHPPPVSARMPTRRWAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALREREALSADPKLSLMPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLVRPKRKHGTKSAEEELARAGWLLNLQHLTLGAQIGEGEFGAVLQGEYLGQ-KVAVKNIK-CDV---TAQAFLDETAVMTKMQHENLVRLLGVILHQ-GLYIVMEHVSKGNLVNFLRTRGRALVNTAQLLQFSLHVAEGMEYLESKKLVHRDLAARNILVSEDLVAKVSDFGLAKAERK----GLDSSRLPVKWTAPEALK--HGKFTSKSDVWSFGVLLWEVFSYGRAPYPK-MSLKEVSEAVEKGYRMEP---PEGCPGPVHVLMSSCWEAEPARRPPFRKLAEKLARELRSAGAPASVSGQDADGSTSPRSQEP |
| 4ITJ Chain:A ((8-291)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVIKMKSSDFLE--------FGKVSLAFHRTQGLMIMKTVYKGPNCIEHNEALLEEAKMMNRLRHSRVVKLLGVIIEEGKYSLVMEYMEKGNLMHVLKAEM--STPLSVKGRIILEIIEGMAYLHGKGVIHKDLKPENILVDNDFHIKIADLGLASFKMWSKLN------GTLYYMAPEHLNDVNAKPTEKSDVYSFAVVLWAIFA-NKEPYENAIAEQQLIMAIKSGNRPDVDDITEYCPREIISLMKLCWEANPEARPTFPGIEEKFRPFYLS----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4ITJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128144 for 1838 contacts (-69.7/contact) +
2D Compatibility (PS) -25432 + (NN) -8115 + (LL) 14580
1D Compatibility (HY) -20400 + (ID) 4050
Total energy: -171561.0 ( -93.34 by residue)
QMean score : 0.500
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