Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNFKYLFVLMLAVIVFAAACGNSSSLDNQKNASNDSDSKSGGYKPKELTVQFVPSQNAGTLEAKAKPLEKLLSKELGIPVKVSVSTNYNTIVEAMKSKKVDVGFLPPTAYTLAHDQK-AADLLLQAQRFGVKEDGSASKELVDSYKSEILVKK-D-SKIKSLKDLKGKKIALQDVTSTAGYTFPLAMLKNEAGINATKDMKIVNVKGHDQAVISLLNGDVDAAAVFNDARNTVKKDQPNVFKDTRILKL-----------TQAIPNDTISVRPDM---DKDFQEKLKKAFIDIAKSKEGHKIISEVYSHEGYTETKDSNFDIVREYEKLVKDMK |
| 3QSL Chain:A ((53-256)) | -------------------------------------------------------------------AEVKGFFKDEGLDVSIADFAGGSKALQAVVGGSADVVSGAFEHTLSLQAKGQFYRAF-ALQ--------------GRAPMIGVGVSKKNLPGYKGPADLKGRKIGVTAPGSSTNMVV-NFFLAK-HGLKASD-VSFIGVGAGAGAVTALRSGQIDAISNTDPVVSMLETSGD-----IQIIVDTRTLKDTKEIFGGNMPAGCLYAPQAFVDANPNTAQALTNAIVRA----------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3QSL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -54072 for 1451 contacts (-37.3/contact) +
2D Compatibility (PS) -19811 + (NN) -1753 + (LL) 7464
1D Compatibility (HY) -3600 + (ID) 1600
Total energy: -73372.0 ( -50.57 by residue)
QMean score : 0.478
|
|
|