Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLENVFVKKGNKNILDGCNFNFEKGKSYALVGESGAGKSTLLNIIAGFEDVSQGSIYIEDKLLKKKVDFYRYTLGYLFQNFALLENQTISQNLDLALKFKK-NKKDNMNLKKEVLKKVGLDLDIKRIVSSLSGGEQQRVALARLILKDPKIILADEPTGSLDTKNGKIVIDLLLKLLD-ENKTMIVVTHDLELAKR-FDVIVNISELRS
3RLF Chain:A ((3-211))
SVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPA-ERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGR-
General information:
TITO was launched using:
RESULT:
Template:
3RLF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139571 for 1598 contacts (-87.3/contact) +
2D Compatibility (PS) -22608 + (NN) -10723 + (LL) 64
1D Compatibility (HY) -12000 + (ID) 3200
Total energy: -188038.0 ( -117.67 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_3RLF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RLF-query.scw
PDB file :
Tito_Scwrl_3RLF.pdb
: