Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAPNPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRSFAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWRLDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYDAASKGNAFVE-D-----GKLVADDKAGTELLTFMSELQKNKLLLA-----SKATDPFETGTSIMADNGPWTFPNWDEKFPELKYNENYAITAPLVPDSMVNEENVATYADSKGVVMYAQATDKEKEAAMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSIPAMDDAKYNDIQQIIGEEAWNPIVRGEKKPTKAWSDMKKAEDGVLQE |
| 1URS Chain:A ((30-396)) | -----------------------------------QTITVWSWQTGPELQDVKQIAAQWAKAHG-DKVIVVDQSSNPKGFQFYATAARTGKGPDVVFGMPHDNNGVFAEEGLMAPVPSGVLN----TGLYAPNTIDAIKV-NGTMYSVPVSVQVAAIYYNKKLVPQ-----PPQTWAEFVKDANAHGF--------MYD--QA-NL---YFDY--AIIGGYGGYVFKDNNGTLDPNNIGLDTPGAVQAYTLMRDMVSKYHWMTPSTNGSIAKAEFLAGKIGMYVSGPWDTADIEKA----K--IDFGVTPWPTLPNGK---HATPFLGVITAFVNKESKT--QAADWSLVQALTSAQ-AQQMYFRDSQQIPALLSVQRSSAVQ----SSPTFKAFVEQLRYAVPMPNIPQMQAVWQAM-S-ILQNIIAGKVSPEQGAKDFVQNIQKG--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1URS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102229 for 3478 contacts (-29.4/contact) +
2D Compatibility (PS) -38310 + (NN) -18478 + (LL) 4508
1D Compatibility (HY) -11200 + (ID) 2500
Total energy: -168209.0 ( -48.36 by residue)
QMean score : 0.396
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