Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVTHSKNGYYDGLIFHRVIPEFMIQGGDPDGRGT-GGESIW----GESFEDEFSTEAFNL-RGALSMANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK
3BO7 Chain:A ((5-172))
------------KKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCE---------------------------HLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEEIIVF
General information:
TITO was launched using:
RESULT:
Template:
3BO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53118 for 1226 contacts (-43.3/contact) +
2D Compatibility (PS) -16493 + (NN) -6505 + (LL) 2284
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -88732.0 ( -72.38 by residue)
QMean score : 0.508
(partial model without unconserved sides chains):
PDB file :
Tito_3BO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BO7-query.scw
PDB file :
Tito_Scwrl_3BO7.pdb
: