Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMK-NNTELGRKAKSFMDNGDLVPDEVTNGIVRERLSEDD--AKDGFLLDGFPRTVEQAQELENILSDLGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQRDDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQEIKDVFVDVEKILASF
1UKZ Chain:A ((16-201))
SVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERD----IVESKFILFFDCPEDIMLERLLERGKT---------------------------SGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRVRCDRSVEDVYKDVQDAIRD-
General information:
TITO was launched using:
RESULT:
Template:
1UKZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48326 for 1447 contacts (-33.4/contact) +
2D Compatibility (PS) -19853 + (NN) -9132 + (LL) 732
1D Compatibility (HY) -13600 + (ID) 2900
Total energy: -93079.0 ( -64.33 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1UKZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UKZ-query.scw
PDB file :
Tito_Scwrl_1UKZ.pdb
: