Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTK--QNYDLSI-EEFL------QCVGSNVDDLFRELNEKNQMDINRQVFEAETQATFIENSKSLPAKEGVESFIRELKERGLKLALATSSQRPKPLYHLERLGLLEYFDAIITAEDVTRIKPEPDLFLEALRALDVKASESLIVEDSR-NGLLAGNSAGVNVLVIPNEVTKHSD---LTPNYLERESLAEVDLTEIMAEYNK
2HOQ Chain:A ((1-228))
MVKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL--LEVLARES-
General information:
TITO was launched using:
RESULT:
Template:
2HOQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69425 for 1665 contacts (-41.7/contact) +
2D Compatibility (PS) -23050 + (NN) -9580 + (LL) 164
1D Compatibility (HY) -13200 + (ID) 2400
Total energy: -117491.0 ( -70.57 by residue)
QMean score : 0.533
(partial model without unconserved sides chains):
PDB file :
Tito_2HOQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HOQ-query.scw
PDB file :
Tito_Scwrl_2HOQ.pdb
: