Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTLFTHINSFVWGPPLLALLVGTGIYLSFRLGFIQLRQLSRAFKLIFREDNGQGDISSYAALATALAATVGTGNIVG--VATAIKSGGPGALFWMWVAAFFGMATKYAEGLLAIKYRTKDTNGEISGGPMYYIVNGMGQKWKPLAVFFSAAGILVALLGIGTFTQVNAIASALEHTFKISTRFTSLILAVIVLFIIFGGIKSISKVSEKIVPFMAISYI-------LATLIIIAVNYNKIPHTFQLIFSGAFSGTAAIGGFSGAIVKEAIQKGIARGVFSNESGLGSAPIAAAAAKTKEPVEQGLISMTG--TFIDTIVICTLTGIAILVTGKWLEFDLQGAPLTQASFNTVFGSLGSFALTFCLVLFAFTTILGWSYYGERCFEYLFGTKFINAYRIIFVIMVGLGGFLQLDLIWVIADIVNGLMALPNLIALLVLSPIIVKETQKYFSETKNITKP |
| 4USR Chain:A ((1-357)) | ---------GPAMPPILDVIVIGGGQAALTTAYFLRRTSLS---YLLLDEQPGPGGAWLHAWDSLRLFSPAAWSSIAGWPMPSPTEPGNPT------RNDVIDYLRRYEDRYQFPIQRPVRVDTVTRLDDLWRVQAG-DQQWLARAVI-SATGTWSKPF-IPPYEGRELFQGAQIHSAHYRTPAPFAGKRVMVV----GGGNSGAQVLAELSSVSETLWITQEPPAFLPDEVDGRVLFERATARWKAQQEGR-SIDEPAGGFGDIVMVPPVREARERGVLVAERPFARFT------------ETGVEWADGRRENLDAVIWCSGFRPA----------------LDHLRELGVVEADGKVQVE--------------------------DTRVVKQPNLWLV---GYGDWTG--------------MASATLIGVTRTARSTADQVVQALTATP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4USR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -275998 for 2872 contacts (-96.1/contact) +
2D Compatibility (PS) -36446 + (NN) -1258 + (LL) 10292
1D Compatibility (HY) -4800 + (ID) 3350
Total energy: -311560.0 ( -108.48 by residue)
QMean score : 0.162
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