Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGYLHDAFSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTSHTSSLSETQQLVEQEGRIFTSFTLDMSKPEAIKDSAAELFENRQIDILVNNAGIIHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKR-GHGKIINIASLLSFQGGILVPAYTASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLASRASDYVNGHILAVDGGWLSR
4HP8 Chain:A ((4-246))------PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD-ETLDIIAKDGGNASALLIDFADPLAAKDSFTD----AGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGAILNVDGGWLA-


General information:
TITO was launched using:
RESULT:

Template: 4HP8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1373 -75516 -55.00 -312.05
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.89

3D Compatibility (PKB) : -55.00
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.89
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_4HP8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HP8-query.scw
PDB file : Tito_Scwrl_4HP8.pdb: